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PER1 period circadian regulator 1 [ Lagenorhynchus obliquidens (Pacific white-sided dolphin) ]

Gene ID: 113633043, updated on 15-Mar-2024

Summary

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Gene symbol
PER1
Gene description
period circadian regulator 1
See related
EnsemblRapid:ENSLOBG00000012215
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagenorhynchus obliquidens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Lagenorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current ASM367639v1 (GCF_003676395.1) Unplaced Scaffold NW_020837982.1 (11149832..11164883, complement)

NW_020837982.1Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene vesicle associated membrane protein 2 Neighboring gene U8 small nucleolar RNA Neighboring gene transmembrane protein 107

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020837982 Unplaced Scaffold Reference ASM367639v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in entrainment of circadian clock by photoperiod IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: period circadian protein homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagenorhynchus obliquidens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM367639v1 Primary Assembly

Genomic

  1. NW_020837982.1 Reference ASM367639v1 Primary Assembly

    Range
    11149832..11164883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027130976.1 → XP_026986777.1  LOW QUALITY PROTEIN: period circadian protein homolog 1

    Related
    ENSLOBP00000016598.1, ENSLOBT00000018180.1
    Conserved Domains (2) summary
    pfam08447
    Location:373 → 457
    PAS_3; PAS fold
    pfam12114
    Location:1066 → 1205
    Period_C; Period protein 2/3C-terminal region
Nucleotide Protein
Heading Accession and Version

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