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PTPRE protein tyrosine phosphatase receptor type E [ Lagenorhynchus obliquidens (Pacific white-sided dolphin) ]

Gene ID: 113623534, updated on 15-Mar-2024

Summary

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Gene symbol
PTPRE
Gene description
protein tyrosine phosphatase receptor type E
See related
EnsemblRapid:ENSLOBG00000015383
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagenorhynchus obliquidens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Lagenorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current ASM367639v1 (GCF_003676395.1) Unplaced Scaffold NW_020837955.1 (41262465..41305556)

NW_020837955.1Genomic Context describing neighboring genes Neighboring gene clarin 3 Neighboring gene uncharacterized LOC113623536 Neighboring gene S-phase kinase-associated protein 1-like Neighboring gene U6 spliceosomal RNA Neighboring gene marker of proliferation Ki-67

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020837955 Unplaced Scaffold Reference ASM367639v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase epsilon

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagenorhynchus obliquidens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM367639v1 Primary Assembly

Genomic

  1. NW_020837955.1 Reference ASM367639v1 Primary Assembly

    Range
    41262465..41305556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027112944.1 → XP_026968745.1  receptor-type tyrosine-protein phosphatase epsilon isoform X1

    Related
    ENSLOBP00000021034.1, ENSLOBT00000023040.1
    Conserved Domains (2) summary
    cd14620
    Location:168 → 396
    R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
    cl28904
    Location:483 → 692
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  2. XM_027112945.1 → XP_026968746.1  receptor-type tyrosine-protein phosphatase epsilon isoform X2

    Conserved Domains (2) summary
    cd14620
    Location:168 → 395
    R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
    cl28904
    Location:482 → 691
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  3. XM_027112946.1 → XP_026968747.1  receptor-type tyrosine-protein phosphatase epsilon isoform X3

    Related
    ENSLOBP00000021046.1, ENSLOBT00000023052.1
    Conserved Domains (2) summary
    cd14620
    Location:107 → 335
    R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
    cl28904
    Location:422 → 631
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  4. XM_027112947.1 → XP_026968748.1  receptor-type tyrosine-protein phosphatase epsilon isoform X4

    Conserved Domains (2) summary
    cd14620
    Location:66 → 294
    R-PTPc-E-1; catalytic domain of receptor-type tyrosine-protein phosphatase E, repeat 1
    cl28904
    Location:381 → 590
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
Nucleotide Protein
Heading Accession and Version

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