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LAMA4 laminin subunit alpha 4 [ Lagenorhynchus obliquidens (Pacific white-sided dolphin) ]

Gene ID: 113610290, updated on 15-Mar-2024

Summary

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Gene symbol
LAMA4
Gene description
laminin subunit alpha 4
See related
EnsemblRapid:ENSLOBG00000000467
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagenorhynchus obliquidens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Lagenorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
40
Annotation release Status Assembly Chr Location
100 current ASM367639v1 (GCF_003676395.1) Unplaced Scaffold NW_020837947.1 (46675384..46826904)

NW_020837947.1Genomic Context describing neighboring genes Neighboring gene ret finger protein like 4B Neighboring gene nucleophosmin pseudogene Neighboring gene family with sequence similarity 229 member B Neighboring gene tubulin epsilon 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020837947 Unplaced Scaffold Reference ASM367639v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagenorhynchus obliquidens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM367639v1 Primary Assembly

Genomic

  1. NW_020837947.1 Reference ASM367639v1 Primary Assembly

    Range
    46675384..46826904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027088304.1 → XP_026944105.1  laminin subunit alpha-4 isoform X1

    Related
    ENSLOBP00000000480.1, ENSLOBT00000000573.1
    Conserved Domains (5) summary
    cd00055
    Location:187 → 238
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:1490 → 1625
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam06009
    Location:734 → 861
    Laminin_II; Laminin Domain II
    pfam06008
    Location:298 → 554
    Laminin_I; Laminin Domain I
    cl25732
    Location:407 → 747
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_027088295.1 → XP_026944096.1  laminin subunit alpha-4 isoform X1

    Conserved Domains (5) summary
    cd00055
    Location:187 → 238
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:1490 → 1625
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam06009
    Location:734 → 861
    Laminin_II; Laminin Domain II
    pfam06008
    Location:298 → 554
    Laminin_I; Laminin Domain I
    cl25732
    Location:407 → 747
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_027088310.1 → XP_026944111.1  laminin subunit alpha-4 isoform X2

    Conserved Domains (5) summary
    cd00055
    Location:187 → 238
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:1483 → 1618
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam06009
    Location:727 → 854
    Laminin_II; Laminin Domain II
    pfam06008
    Location:291 → 547
    Laminin_I; Laminin Domain I
    cl25732
    Location:400 → 740
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_027088321.1 → XP_026944122.1  laminin subunit alpha-4 isoform X3

    Conserved Domains (5) summary
    cd00055
    Location:187 → 238
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:1477 → 1612
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam06009
    Location:721 → 848
    Laminin_II; Laminin Domain II
    pfam06008
    Location:285 → 541
    Laminin_I; Laminin Domain I
    cl25732
    Location:394 → 734
    SMC_N; RecF/RecN/SMC N terminal domain

  5. XM_027088323.1 → XP_026944124.1  laminin subunit alpha-4 isoform X4

    Conserved Domains (4) summary
    cd00110
    Location:1183 → 1318
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam06009
    Location:427 → 554
    Laminin_II; Laminin Domain II
    pfam06008
    Location:16 → 247
    Laminin_I; Laminin Domain I
    cl25732
    Location:100 → 440
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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