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Rbm47 RNA binding motif protein 47 [ Urocitellus parryii (Arctic ground squirrel) ]

Gene ID: 113181161, updated on 15-Mar-2024

Summary

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Gene symbol
Rbm47
Gene description
RNA binding motif protein 47
See related
Ensembl:ENSUPAG00010018774
Gene type
protein coding
RefSeq status
MODEL
Organism
Urocitellus parryii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020539890.1 (9496014..9507951, complement)

NW_020539890.1Genomic Context describing neighboring genes Neighboring gene succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial-like Neighboring gene cholinergic receptor nicotinic alpha 9 subunit Neighboring gene NOP2/Sun RNA methyltransferase family member 7 Neighboring gene amyloid beta precursor protein binding family B member 2 Neighboring gene high mobility group protein B1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020539890 Unplaced Scaffold Reference ASM342692v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein 47

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342692v1

Genomic

  1. NW_020539890.1 Reference ASM342692v1

    Range
    9496014..9507951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026386567.1 → XP_026242352.1  RNA-binding protein 47 isoform X1

    UniProtKB/TrEMBL
    A0A8D2I6N3
    Related
    ENSUPAP00010023732.1, ENSUPAT00010026992.1
    Conserved Domains (1) summary
    TIGR01648
    Location:21 → 593
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  2. XM_026386577.1 → XP_026242362.1  RNA-binding protein 47 isoform X2

    UniProtKB/TrEMBL
    A0A8D2I3R3
    Related
    ENSUPAP00010023736.1, ENSUPAT00010026996.1
    Conserved Domains (1) summary
    TIGR01648
    Location:21 → 524
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
Nucleotide Protein
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