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STRBP spermatid perinuclear RNA binding protein [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112977523, updated on 15-Mar-2024

Summary

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Gene symbol
STRBP
Gene description
spermatid perinuclear RNA binding protein
See related
Ensembl:ENSARWG00000005584
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020447420.1 (91475..161959, complement)

NW_020447420.1Genomic Context describing neighboring genes Neighboring gene RAB GTPase activating protein 1 Neighboring gene uncharacterized LOC112977593 Neighboring gene G protein-coupled receptor 21 Neighboring gene crumbs cell polarity complex component 2 Neighboring gene DENN domain containing 1A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020447420 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spermatid perinuclear RNA-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020447420.1 Reference aptRow1

    Range
    91475..161959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026090002.1 → XP_025945787.1  spermatid perinuclear RNA-binding protein isoform X1

    Conserved Domains (2) summary
    smart00572
    Location:80 → 333
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    smart00358
    Location:389 → 452
    DSRM; Double-stranded RNA binding motif

  2. XM_026090010.1 → XP_025945795.1  spermatid perinuclear RNA-binding protein isoform X2

    Conserved Domains (2) summary
    smart00572
    Location:80 → 332
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    smart00358
    Location:388 → 451
    DSRM; Double-stranded RNA binding motif

  3. XM_026090018.1 → XP_025945803.1  spermatid perinuclear RNA-binding protein isoform X3

    Related
    ENSARWP00000007990.1, ENSARWT00000009111.1
    Conserved Domains (2) summary
    smart00572
    Location:47 → 300
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    smart00358
    Location:356 → 419
    DSRM; Double-stranded RNA binding motif

  4. XM_026089986.1 → XP_025945771.1  spermatid perinuclear RNA-binding protein isoform X1

    Related
    ENSARWP00000007989.1, ENSARWT00000009110.1
    Conserved Domains (2) summary
    smart00572
    Location:80 → 333
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    smart00358
    Location:389 → 452
    DSRM; Double-stranded RNA binding motif

  5. XM_026089994.1 → XP_025945779.1  spermatid perinuclear RNA-binding protein isoform X1

    Conserved Domains (2) summary
    smart00572
    Location:80 → 333
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    smart00358
    Location:389 → 452
    DSRM; Double-stranded RNA binding motif
Nucleotide Protein
Heading Accession and Version

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