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SFR1 SWI5 dependent homologous recombination repair protein 1 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112968024, updated on 15-Mar-2024

Summary

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Gene symbol
SFR1
Gene description
SWI5 dependent homologous recombination repair protein 1
See related
Ensembl:ENSARWG00000000452
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020449418.1 (5792288..5797535, complement)

NW_020449418.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 58 Neighboring gene inositol 1,4,5-trisphosphate receptor interacting protein Neighboring gene glutathione S-transferase omega 1 Neighboring gene cilia and flagella associated protein 43 Neighboring gene collagen type XVII alpha 1 chain Neighboring gene STE20 like kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020449418 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Swi5-Sfr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
swi5-dependent recombination DNA repair protein 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020449418.1 Reference aptRow1

    Range
    5792288..5797535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026069822.1 → XP_025925607.1  swi5-dependent recombination DNA repair protein 1 homolog

    Conserved Domains (1) summary
    pfam10376
    Location:13 → 214
    Mei5; Double-strand recombination repair protein

  2. XM_026069823.1 → XP_025925608.1  swi5-dependent recombination DNA repair protein 1 homolog

    Related
    ENSARWP00000000516.1, ENSARWT00000000606.1
    Conserved Domains (1) summary
    pfam10376
    Location:13 → 214
    Mei5; Double-strand recombination repair protein

  3. XM_026069824.1 → XP_025925609.1  swi5-dependent recombination DNA repair protein 1 homolog

    Conserved Domains (1) summary
    pfam10376
    Location:13 → 214
    Mei5; Double-strand recombination repair protein
Nucleotide Protein
Heading Accession and Version

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