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CHSY3 chondroitin sulfate synthase 3 [ Vulpes vulpes (red fox) ]

Gene ID: 112917102, updated on 15-Mar-2024

Summary

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Gene symbol
CHSY3
Gene description
chondroitin sulfate synthase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356452.1 (15154890..15421354, complement)

NW_020356452.1Genomic Context describing neighboring genes Neighboring gene kinesin-like protein KIF3A Neighboring gene developmentally-regulated GTP-binding protein 1 pseudogene Neighboring gene nucleoside diphosphate kinase, mitochondrial pseudogene Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 19 Neighboring gene membrane integral NOTCH2 associated receptor 2 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356452 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356452.1 Reference VulVul2.2 Primary Assembly

    Range
    15154890..15421354 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025994981.1 → XP_025850766.1  chondroitin sulfate synthase 3

    UniProtKB/TrEMBL
    A0A3Q7S7G0
    Conserved Domains (2) summary
    pfam05679
    Location:153 → 689
    CHGN; Chondroitin N-acetylgalactosaminyltransferase
    cl21608
    Location:2 → 223
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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