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SARM1 sterile alpha and TIR motif containing 1 [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112808163, updated on 15-Mar-2024

Summary

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Gene symbol
SARM1
Gene description
sterile alpha and TIR motif containing 1
See related
EnsemblRapid:ENSCURG00000020747
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020313039.1 (5151171..5169760, complement)

NW_020313039.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 13 member 2 Neighboring gene solute carrier family 46 member 1 Neighboring gene vitronectin Neighboring gene SEBOX homeobox

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020313039 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+ nucleosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of MyD88-independent toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to axon injury IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterile alpha and TIR motif-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020313039.1 Reference ASM326570v1 Primary Assembly

    Range
    5151171..5169760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025851117.1 → XP_025706902.1  sterile alpha and TIR motif-containing protein 1

    UniProtKB/TrEMBL
    A0A3Q7MIZ8
    Related
    ENSCURP00000033752.1, ENSCURT00000038564.1
    Conserved Domains (3) summary
    cd09502
    Location:478 → 547
    SAM_SARM1-like_repeat2; SAM domain of SARM1-like, repeat 2
    smart00255
    Location:562 → 702
    TIR; Toll - interleukin 1 - resistance
    cl15755
    Location:409 → 477
    SAM_superfamily; SAM (Sterile alpha motif )
Nucleotide Protein
Heading Accession and Version

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