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PPM1F protein phosphatase, Mg2+/Mn2+ dependent 1F [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112412236, updated on 15-Mar-2024

Summary

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Gene symbol
PPM1F
Gene description
protein phosphatase, Mg2+/Mn2+ dependent 1F
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020175053.1 (7564714..7588814, complement)

NW_020175053.1Genomic Context describing neighboring genes Neighboring gene yippee like 1 Neighboring gene mitogen-activated protein kinase 1 Neighboring gene non-histone chromosomal protein HMG-14 pseudogene Neighboring gene DNA topoisomerase III beta Neighboring gene immunoglobulin iota chain-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020175053 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cation binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cysteine-type endopeptidase activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase 1F

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020175053.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    7564714..7588814 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024763831.1 → XP_024619599.1  protein phosphatase 1F isoform X2

    UniProtKB/TrEMBL
    A0A341CXX9
    Conserved Domains (1) summary
    pfam00481
    Location:143 → 317
    PP2C; Protein phosphatase 2C

  2. XM_024763830.1 → XP_024619598.1  protein phosphatase 1F isoform X1

    UniProtKB/TrEMBL
    A0A341CXV6
    Conserved Domains (1) summary
    pfam00481
    Location:158 → 409
    PP2C; Protein phosphatase 2C
Nucleotide Protein
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