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NABP1 nucleic acid binding protein 1 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112392119, updated on 15-Mar-2024

Summary

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Gene symbol
NABP1
Gene description
nucleic acid binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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See NABP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020185317.1 (4278179..4286686, complement)

NW_020185317.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein with EGF like and two follistatin like domains 2 Neighboring gene caveolae associated protein 2 Neighboring gene myosin IB Neighboring gene transmembrane protein 216 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020185317 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to ionizing radiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SOSS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SOSS complex subunit B2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020185317.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    4278179..4286686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024733642.1 → XP_024589410.1  SOSS complex subunit B2

    UniProtKB/TrEMBL
    A0A341AFM0
    Conserved Domains (1) summary
    cd04491
    Location:22 → 99
    SoSSB_OBF; A subfamily of OB folds similar to the OB fold of the crenarchaeote Sulfolobus solfataricus single-stranded (ss) DNA-binding protein (SSoSSB). SSoSSB has a single OB fold, and it physically and functionally interacts with RNA polymerase. In vitro, SSoSSB ...
Nucleotide Protein
Heading Accession and Version

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