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CTNNAL1 catenin alpha like 1 [ Terrapene triunguis (Three-toed box turtle) ]

Gene ID: 112108430, updated on 19-May-2024

Summary

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Gene symbol
CTNNAL1
Gene description
catenin alpha like 1
See related
Ensembl:ENSTMTG00000007394
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene triunguis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664964.1 (1169606..1312162, complement)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019960265.1 (306632..467682, complement)

NW_020664964.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 39 member 6 Neighboring gene actin binding transcription modulator Neighboring gene elongator acetyltransferase complex subunit 2 Neighboring gene gamma-aminobutyric acid type B receptor subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-catulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664964.1 Reference T_m_triunguis-2.0

    Range
    1169606..1312162 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024202558.2 → XP_024058326.1  alpha-catulin isoform X2

    UniProtKB/TrEMBL
    A0A674ISL8
    Conserved Domains (1) summary
    pfam01044
    Location:26 → 453
    Vinculin; Vinculin family

  2. XM_024202557.2 → XP_024058325.1  alpha-catulin isoform X1

    UniProtKB/TrEMBL
    A0A674ISL8
    Related
    ENSTMTP00000010702.1, ENSTMTT00000011062.1
    Conserved Domains (1) summary
    pfam01044
    Location:26 → 520
    Vinculin; Vinculin family
Nucleotide Protein
Heading Accession and Version

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