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RPS27A ribosomal protein S27a [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111926401, updated on 3-Aug-2024

Summary

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Gene symbol
RPS27A
Gene description
ribosomal protein S27a
See related
Ensembl:ENSCCEG00000010628
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 3 Unlocalized Scaffold NW_019776331.1 (16786367..16787975)

NW_019776331.1Genomic Context describing neighboring genes Neighboring gene spectrin beta, non-erythrocytic 1 Neighboring gene EMAP like 6 Neighboring gene reticulon 4 Neighboring gene prolyl-tRNA synthetase associated domain-containing protein 1-like Neighboring gene mitochondrial translational initiation factor 2 Neighboring gene coiled-coil domain containing 88A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776331 Chromosome 3 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tag activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modification-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-40S ribosomal protein S27a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776331.1 Reference cyaCae2

    Range
    16786367..16787975
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023923074.1 → XP_023778842.1  ubiquitin-40S ribosomal protein S27a

    UniProtKB/TrEMBL
    A0A8C0UL93
    Related
    ENSCCEP00000010795.1, ENSCCET00000016905.1
    Conserved Domains (2) summary
    cd01803
    Location:1 → 76
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
    pfam01599
    Location:103 → 147
    Ribosomal_S27; Ribosomal protein S27a
Nucleotide Protein
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