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wdtc1 WD and tetratricopeptide repeats 1 [ Seriola lalandi dorsalis ]

Gene ID: 111664958, updated on 15-Mar-2024

Summary

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Gene symbol
wdtc1
Gene description
WD and tetratricopeptide repeats 1
See related
Ensembl:ENSSLDG00000016693
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525162.1 (1547570..1555246, complement)

NW_019525162.1Genomic Context describing neighboring genes Neighboring gene trophoblast glycoprotein-like Neighboring gene transmembrane protein 222 Neighboring gene centrosomal protein 85 Neighboring gene UBX domain protein 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019525162 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD and tetratricopeptide repeats protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525162.1 Reference Sedor1 Primary Assembly

    Range
    1547570..1555246 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023419784.1 → XP_023275552.1  WD and tetratricopeptide repeats protein 1

    UniProtKB/TrEMBL
    A0A3B4XSL7
    Conserved Domains (4) summary
    sd00006
    Location:367 → 391
    TPR; TPR repeat [structural motif]
    sd00039
    Location:57 → 93
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:45 → 169
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cl26005
    Location:350 → 497
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional

  2. XM_023419783.1 → XP_023275551.1  WD and tetratricopeptide repeats protein 1

    UniProtKB/TrEMBL
    A0A3B4XSL7
    Related
    ENSSLDP00000021385.1, ENSSLDT00000022092.1
    Conserved Domains (4) summary
    sd00006
    Location:367 → 391
    TPR; TPR repeat [structural motif]
    sd00039
    Location:57 → 93
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:45 → 169
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cl26005
    Location:350 → 497
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
Nucleotide Protein
Heading Accession and Version

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