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PER1 period circadian regulator 1 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111185783, updated on 15-Mar-2024

Summary

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Gene symbol
PER1
Gene description
period circadian regulator 1
See related
Ensembl:ENSDLEG00000021732
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See PER1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098035.1 (11350718..11365772, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160909.1 (11278585..11293641, complement)

NW_022098035.1Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene vesicle associated membrane protein 2 Neighboring gene U8 small nucleolar RNA Neighboring gene transmembrane protein 107

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in entrainment of circadian clock by photoperiod IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
period circadian protein homolog 1
Names
period circadian clock 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098035.1 Reference ASM228892v3 Primary Assembly

    Range
    11350718..11365772 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022595690.2 → XP_022451398.1  period circadian protein homolog 1 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9Q7G1
    Conserved Domains (2) summary
    pfam08447
    Location:373 → 457
    PAS_3; PAS fold
    pfam12114
    Location:1046 → 1185
    Period_C; Period protein 2/3C-terminal region

  2. XM_022595688.2 → XP_022451396.1  period circadian protein homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9Q121
    Related
    ENSDLEP00000030522.1, ENSDLET00000033519.1
    Conserved Domains (2) summary
    pfam08447
    Location:373 → 457
    PAS_3; PAS fold
    pfam12114
    Location:1061 → 1200
    Period_C; Period protein 2/3C-terminal region

  3. XM_022595689.2 → XP_022451397.1  period circadian protein homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9Q121
    Conserved Domains (2) summary
    pfam08447
    Location:373 → 457
    PAS_3; PAS fold
    pfam12114
    Location:1061 → 1200
    Period_C; Period protein 2/3C-terminal region

  4. XM_022595687.2 → XP_022451395.1  period circadian protein homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9Q121
    Conserved Domains (2) summary
    pfam08447
    Location:373 → 457
    PAS_3; PAS fold
    pfam12114
    Location:1061 → 1200
    Period_C; Period protein 2/3C-terminal region

  5. XM_022595691.2 → XP_022451399.1  period circadian protein homolog 1 isoform X3

    UniProtKB/TrEMBL
    A0A2Y9PX66
    Conserved Domains (2) summary
    pfam08447
    Location:373 → 457
    PAS_3; PAS fold
    pfam12114
    Location:1034 → 1127
    Period_C; Period protein 2/3C-terminal region
Nucleotide Protein
Heading Accession and Version

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