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PTPRA protein tyrosine phosphatase receptor type A [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111184378, updated on 15-Mar-2024

Summary

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Gene symbol
PTPRA
Gene description
protein tyrosine phosphatase receptor type A
See related
Ensembl:ENSDLEG00000014710
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098028.1 (29433193..29618325)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160901.1 (14424836..14609918)

NW_022098028.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C20orf141 homolog Neighboring gene transmembrane protein 239 Neighboring gene PC-esterase domain containing 1A Neighboring gene VPS16 core subunit of CORVET and HOPS complexes Neighboring gene proline-rich protein 13 pseudogene Neighboring gene gonadotropin releasing hormone 2 pseudogene Neighboring gene mitochondrial ribosomal protein S26

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098028.1 Reference ASM228892v3 Primary Assembly

    Range
    29433193..29618325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022592852.2 → XP_022448560.1  receptor-type tyrosine-protein phosphatase alpha isoform X2

    UniProtKB/TrEMBL
    A0A2Y9PSK9
    Related
    ENSDLEP00000020269.1, ENSDLET00000022341.1
    Conserved Domains (2) summary
    cd14621
    Location:205 → 500
    R-PTPc-A-1; catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 1
    cd14623
    Location:554 → 781
    R-PTPc-A-2; catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 2

  2. XM_022592851.2 → XP_022448559.1  receptor-type tyrosine-protein phosphatase alpha isoform X1

    UniProtKB/TrEMBL
    A0A2Y9PNW4
    Related
    ENSDLEP00000020189.1, ENSDLET00000022255.1
    Conserved Domains (3) summary
    cd14621
    Location:214 → 509
    R-PTPc-A-1; catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 1
    cd14623
    Location:563 → 790
    R-PTPc-A-2; catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 2
    pfam07010
    Location:5 → 179
    Endomucin

  3. XM_022592849.2 → XP_022448557.1  receptor-type tyrosine-protein phosphatase alpha isoform X3

    UniProtKB/TrEMBL
    A0A2Y9PZG5
    Conserved Domains (2) summary
    cd14621
    Location:59 → 354
    R-PTPc-A-1; catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 1
    cd14623
    Location:408 → 635
    R-PTPc-A-2; catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 2

  4. XM_022592850.2 → XP_022448558.1  receptor-type tyrosine-protein phosphatase alpha isoform X3

    UniProtKB/TrEMBL
    A0A2Y9PZG5
    Conserved Domains (2) summary
    cd14621
    Location:59 → 354
    R-PTPc-A-1; catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 1
    cd14623
    Location:408 → 635
    R-PTPc-A-2; catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 2

  5. XM_022592854.2 → XP_022448562.1  receptor-type tyrosine-protein phosphatase alpha isoform X4

    UniProtKB/TrEMBL
    A0A2Y9PYY4
    Conserved Domains (2) summary
    cd14623
    Location:237 → 464
    R-PTPc-A-2; catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 2
    cl28904
    Location:1 → 183
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
Nucleotide Protein
Heading Accession and Version

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