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CDON cell adhesion associated, oncogene regulated [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111165481, updated on 15-Mar-2024

Summary

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Gene symbol
CDON
Gene description
cell adhesion associated, oncogene regulated
See related
Ensembl:ENSDLEG00000019538
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See CDON in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098055.1 (7631167..7727047)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160948.1 (7631328..7727207)

NW_022098055.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 118 member B Neighboring gene uncharacterized LOC111165519 Neighboring gene RNA pseudouridine synthase D4 Neighboring gene V-set and immunoglobulin domain containing 10 like 2 Neighboring gene DEAD-box helicase 25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell adhesion molecule-related/down-regulated by oncogenes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098055.1 Reference ASM228892v3 Primary Assembly

    Range
    7631167..7727047
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022556228.1 → XP_022411936.1  cell adhesion molecule-related/down-regulated by oncogenes isoform X2

    UniProtKB/TrEMBL
    A0A2Y9LRD9
    Related
    ENSDLEP00000027048.1, ENSDLET00000029732.1
    Conserved Domains (5) summary
    smart00408
    Location:326 → 387
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:717 → 807
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:587 → 663
    fn3; Fibronectin type III domain
    pfam13927
    Location:404 → 504
    Ig_3; Immunoglobulin domain
    cl11960
    Location:231 → 308
    Ig; Immunoglobulin domain

  2. XM_022556225.1 → XP_022411933.1  cell adhesion molecule-related/down-regulated by oncogenes isoform X1

    UniProtKB/TrEMBL
    A0A2Y9M3J2
    Conserved Domains (6) summary
    smart00408
    Location:72 → 133
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:746 → 836
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:342 → 426
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:616 → 692
    fn3; Fibronectin type III domain
    pfam13927
    Location:433 → 533
    Ig_3; Immunoglobulin domain
    cl11960
    Location:260 → 337
    Ig; Immunoglobulin domain

  3. XM_022556227.1 → XP_022411935.1  cell adhesion molecule-related/down-regulated by oncogenes isoform X2

    UniProtKB/TrEMBL
    A0A2Y9LRD9
    Conserved Domains (5) summary
    smart00408
    Location:326 → 387
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:717 → 807
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:587 → 663
    fn3; Fibronectin type III domain
    pfam13927
    Location:404 → 504
    Ig_3; Immunoglobulin domain
    cl11960
    Location:231 → 308
    Ig; Immunoglobulin domain
Nucleotide Protein
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