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inpp5d inositol polyphosphate-5-phosphatase D [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110954889, updated on 15-Mar-2024

Summary

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Gene symbol
inpp5d
Gene description
inositol polyphosphate-5-phosphatase D
See related
Ensembl:ENSAPOG00000017974
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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See inpp5d in Genome Data Viewer
Location:
chromosome: 4
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 4 NC_067116.1 (32039711..32057232)

Chromosome 4 - NC_067116.1Genomic Context describing neighboring genes Neighboring gene Sin3A-associated protein a Neighboring gene unconventional myosin-VIIb Neighboring gene G protein-coupled receptor 17 Neighboring gene smx5 Neighboring gene BCL6A transcription repressor a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067116.1 Chromosome 4 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067116.1 Reference KAUST_Apoly_ChrSc

    Range
    32039711..32057232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022199637.2 → XP_022055329.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X1

    Conserved Domains (3) summary
    cd10343
    Location:5 → 105
    SH2_SHIP; Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)
    cl00490
    Location:385 → 691
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
    cl26464
    Location:966 → 1072
    Atrophin-1; Atrophin-1 family

  2. XM_022199638.2 → XP_022055330.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1GUG9
    Related
    ENSAPOP00000031032.1
    Conserved Domains (3) summary
    cd10343
    Location:5 → 105
    SH2_SHIP; Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)
    cl00490
    Location:385 → 691
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
    cl26464
    Location:966 → 1067
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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