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LRP10 LDL receptor related protein 10 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110585143, updated on 15-Mar-2024

Summary

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Gene symbol
LRP10
Gene description
LDL receptor related protein 10
See related
EnsemblRapid:ENSNSCG00000020582
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 9 NC_058411.1 (71465676..71471317, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734356.1 (11499663..11505304, complement)

Chromosome 9 - NC_058411.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 23 Neighboring gene RRAD and GEM like GTPase 2 Neighboring gene U6 spliceosomal RNA Neighboring gene matrix metallopeptidase 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
low-density lipoprotein receptor-related protein 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058411.1 Reference ASM220157v2

    Range
    71465676..71471317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021695301.2 → XP_021550976.2  low-density lipoprotein receptor-related protein 10

    UniProtKB/TrEMBL
    A0A2Y9HGZ2
    Conserved Domains (4) summary
    PRK04654
    Location:573 → 665
    PRK04654; sec-independent translocase; Provisional
    cd00041
    Location:200 → 302
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00112
    Location:399 → 433
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cl00049
    Location:34 → 134
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
Nucleotide Protein
Heading Accession and Version

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