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NCOA7 nuclear receptor coactivator 7 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110479688, updated on 14-Aug-2024

Summary

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Gene symbol
NCOA7
Gene description
nuclear receptor coactivator 7
Locus tag
RLOC_00000442
See related
Ensembl:ENSLSDG00000015983
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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See NCOA7 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
19
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 3 NC_042568.1 (61115649..61199270, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018657208.1 (1710508..1794127, complement)

Chromosome 3 - NC_042568.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110479668 Neighboring gene histidine triad nucleotide binding protein 3 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene hes related family bHLH transcription factor with YRPW motif 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor coactivator 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042568.1 Reference lonStrDom2 Primary Assembly

    Range
    61115649..61199270 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021547146.2 → XP_021402821.1  nuclear receptor coactivator 7 isoform X1

    UniProtKB/TrEMBL
    A0A218V4B3
    Related
    ENSLSDP00000022611.1
    Conserved Domains (2) summary
    smart00584
    Location:785 → 947
    TLDc; domain in TBC and LysM domain containing proteins
    pfam01476
    Location:133 → 169
    LysM; LysM domain

  2. XM_031504380.1 → XP_031360240.1  nuclear receptor coactivator 7 isoform X1

    UniProtKB/TrEMBL
    A0A218V4B3
    Conserved Domains (2) summary
    smart00584
    Location:785 → 947
    TLDc; domain in TBC and LysM domain containing proteins
    pfam01476
    Location:133 → 169
    LysM; LysM domain

  3. XM_031504381.1 → XP_031360241.1  nuclear receptor coactivator 7 isoform X2

    Conserved Domains (2) summary
    smart00584
    Location:647 → 809
    TLDc; domain in TBC and LysM domain containing proteins
    pfam01476
    Location:133 → 169
    LysM; LysM domain

  4. XM_021547145.2 → XP_021402820.1  nuclear receptor coactivator 7 isoform X1

    UniProtKB/TrEMBL
    A0A218V4B3
    Related
    ENSLSDP00000022610.1
    Conserved Domains (2) summary
    smart00584
    Location:785 → 947
    TLDc; domain in TBC and LysM domain containing proteins
    pfam01476
    Location:133 → 169
    LysM; LysM domain

  5. XM_021547144.2 → XP_021402819.1  nuclear receptor coactivator 7 isoform X1

    UniProtKB/TrEMBL
    A0A218V4B3
    Conserved Domains (2) summary
    smart00584
    Location:785 → 947
    TLDc; domain in TBC and LysM domain containing proteins
    pfam01476
    Location:133 → 169
    LysM; LysM domain

  6. XM_021547148.2 → XP_021402823.1  nuclear receptor coactivator 7 isoform X3

    Conserved Domains (1) summary
    smart00584
    Location:61 → 223
    TLDc; domain in TBC and LysM domain containing proteins
Nucleotide Protein
Heading Accession and Version

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