2MKX


Conserved Protein Domain Family
LysM
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pfam01476: LysM (this model, PSSM-Id:366664 is obsolete and has been replaced by 396179)
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LysM domain
The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
Links
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Statistics
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PSSM-Id: 366664
Aligned: 156 rows
Threshold Bit Score: 32.3687
Created: 24-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2MKX_A         7 YTVKSGDTLNKIAAQY--------GVSVANLRSWN-GISGDL-IFVGQKLIVK 49  Enterococcus faecalis V583
O83836       311 YTVRKGDTISAIALRAg-------LKHMGTLLSVN-GISNARrLSVGDQITIP 355 Treponema pallidum
Q9P403       185 YSVVSGDTLTSIAQAL--------QITLQSLKDANpGVVPEH-LNVGQKLNVP 228 Colletotrichum lindemuthianum
Q03415         3 ILIRPGDSLWYFSDLF--------KIPLQLLLDSNrNINPQL-LQVGQRIQIP 46  Lysinibacillus sphaericus
P74517        87 HQVKEGESLWQISQAF--------QVDAKAIALAN-SISTDTeLQAGQVLNIP 130 Synechocystis sp. PCC 6803
O86394       202 HTVRKGETVKQIAAAIrpkhltleQVA-DALLKANpNVSAHGrLRAGSVLHIP 253 Neisseria meningitidis
O65213       106 YTIQPGDTFWAIAQRR--------GTTVDVIQSLNpGVNPAR-LQVGQVINVP 149 Volvox carteri f. nagariensis
Q03415        53 YTITQGDSLWQIAQNK--------NLPLNAILLVNpEIQPSR-LHIGQTIQVP 96  Lysinibacillus sphaericus
O64825       121 YTIQPNDSYFAIANDTlq-----gLSTCQALAKQN-NVSSQS-LFPGMRIVVP 166 thale cress
WP_045166906 266 HTVRSNESLYDISQQY--------GVRLKNIMKANrKIVKRG-IKAGDRVVLP 309 Prevotella intermedia
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