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USP31 ubiquitin specific peptidase 31 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110477766, updated on 14-Aug-2024

Summary

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Gene symbol
USP31
Gene description
ubiquitin specific peptidase 31
Locus tag
RLOC_00006127
See related
Ensembl:ENSLSDG00000018185
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
17
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 14 NC_042580.1 (13563521..13590886)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018657099.1 (456634..485817, complement)

Chromosome 14 - NC_042580.1Genomic Context describing neighboring genes Neighboring gene sodium channel epithelial 1 subunit beta Neighboring gene sodium channel epithelial 1 subunit gamma Neighboring gene uncharacterized LOC110477771 Neighboring gene heparan sulfate-glucosamine 3-sulfotransferase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 31
Names
Ubiquitin carboxyl-terminal hydrolase 31

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042580.1 Reference lonStrDom2 Primary Assembly

    Range
    13563521..13590886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021543846.2 → XP_021399521.1  ubiquitin carboxyl-terminal hydrolase 31

    UniProtKB/TrEMBL
    A0A218UDC7
    Related
    ENSLSDP00000026071.1
    Conserved Domains (2) summary
    cl02553
    Location:117 → 750
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    cl28033
    Location:908 → 1197
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

RNA

  1. XR_002466637.2 RNA Sequence

  2. XR_002466636.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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