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ZBTB17 zinc finger and BTB domain containing 17 [ Numida meleagris (helmeted guineafowl) ]

Gene ID: 110408620, updated on 15-Mar-2024

Summary

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Gene symbol
ZBTB17
Gene description
zinc finger and BTB domain containing 17
Gene type
protein coding
RefSeq status
MODEL
Organism
Numida meleagris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Numididae; Numida
Orthologs
human mouse all
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Genomic context

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See ZBTB17 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
16
Annotation release Status Assembly Chr Location
100 current NumMel1.0 (GCF_002078875.1) 20 NC_034428.1 (4442578..4448611, complement)

Chromosome 20 - NC_034428.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110408595 Neighboring gene uncharacterized LOC110408596 Neighboring gene spen family transcriptional repressor Neighboring gene uncharacterized LOC110408629 Neighboring gene heat shock protein family B (small) member 7 Neighboring gene chloride voltage-gated channel Ka

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034428.1 Chromosome 20 Reference NumMel1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Numida meleagris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NumMel1.0 Primary Assembly

Genomic

  1. NC_034428.1 Reference NumMel1.0 Primary Assembly

    Range
    4442578..4448611 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021417527.1 → XP_021273202.1  zinc finger and BTB domain-containing protein 17 isoform X1

    Conserved Domains (5) summary
    COG5048
    Location:315 → 627
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:486 → 506
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:626 → 645
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 109
    BTB; BTB/POZ domain
    cl27544
    Location:154 → 238
    Herpes_glycop_D; Herpesvirus glycoprotein D/GG/GX domain

  2. XM_021417528.1 → XP_021273203.1  zinc finger and BTB domain-containing protein 17 isoform X2

    Conserved Domains (5) summary
    COG5048
    Location:289 → 601
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:460 → 480
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:600 → 619
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 109
    BTB; BTB/POZ domain
    pfam06614
    Location:137 → 267
    Neuromodulin

  3. XM_021417525.1 → XP_021273200.1  zinc finger and BTB domain-containing protein 17 isoform X1

    Conserved Domains (5) summary
    COG5048
    Location:315 → 627
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:486 → 506
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:626 → 645
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 109
    BTB; BTB/POZ domain
    cl27544
    Location:154 → 238
    Herpes_glycop_D; Herpesvirus glycoprotein D/GG/GX domain

  4. XM_021417526.1 → XP_021273201.1  zinc finger and BTB domain-containing protein 17 isoform X1

    Conserved Domains (5) summary
    COG5048
    Location:315 → 627
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:486 → 506
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:626 → 645
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 109
    BTB; BTB/POZ domain
    cl27544
    Location:154 → 238
    Herpes_glycop_D; Herpesvirus glycoprotein D/GG/GX domain

  5. XM_021417531.1 → XP_021273206.1  zinc finger and BTB domain-containing protein 17 isoform X4

    Conserved Domains (3) summary
    COG5048
    Location:135 → 447
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:306 → 326
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:446 → 465
    ZF_C2H2; C2H2 Zn finger [structural motif]

  6. XM_021417529.1 → XP_021273204.1  zinc finger and BTB domain-containing protein 17 isoform X3

    Conserved Domains (5) summary
    COG5048
    Location:315 → 627
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:486 → 506
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:626 → 645
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 109
    BTB; BTB/POZ domain
    cl27544
    Location:154 → 238
    Herpes_glycop_D; Herpesvirus glycoprotein D/GG/GX domain
Nucleotide Protein
Heading Accession and Version

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