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Rogdi rogdi atypical leucine zipper [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110311634, updated on 15-Mar-2024

Summary

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Gene symbol
Rogdi
Gene description
rogdi atypical leucine zipper
See related
Ensembl:MGP_CAROLIEiJ_G0020418
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 16 NC_034585.1 (1275740..1281100, complement)

Chromosome 16 - NC_034585.1Genomic Context describing neighboring genes Neighboring gene septin 12 Neighboring gene small integral membrane protein 22 Neighboring gene glyoxylate reductase 1 homolog Neighboring gene U6 spliceosomal RNA Neighboring gene ubinuclein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034585.1 Chromosome 16 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of RAVE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein rogdi homolog
Names
rogdi homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034585.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    1275740..1281100 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021185064.2 → XP_021040723.1  protein rogdi homolog isoform X3

    UniProtKB/TrEMBL
    A0A6P5R0J4
    Conserved Domains (1) summary
    pfam10259
    Location:18 → 244
    Rogdi_lz; Rogdi leucine zipper containing protein

  2. XM_021185063.2 → XP_021040722.1  protein rogdi homolog isoform X2

    UniProtKB/TrEMBL
    A0A6P5R6W2
    Related
    MGP_CAROLIEiJ_P0040246, MGP_CAROLIEiJ_T0040246.1
    Conserved Domains (1) summary
    pfam10259
    Location:18 → 276
    Rogdi_lz; Rogdi leucine zipper containing protein

  3. XM_021185062.2 → XP_021040721.1  protein rogdi homolog isoform X1

    UniProtKB/TrEMBL
    A0A6P5R9V8
    Conserved Domains (1) summary
    pfam10259
    Location:18 → 288
    Rogdi_lz; Rogdi leucine zipper containing protein
Nucleotide Protein
Heading Accession and Version

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