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Tagln2 transgelin 2 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110291941, updated on 15-Mar-2024

Summary

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Gene symbol
Tagln2
Gene description
transgelin 2
See related
Ensembl:MGP_CAROLIEiJ_G0014898
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 1 NC_034570.1 (162770887..162778232)

Chromosome 1 - NC_034570.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110289865 Neighboring gene SLAM family member 9 Neighboring gene immunoglobulin superfamily member 9 Neighboring gene cilia and flagella associated protein 45 Neighboring gene uncharacterized LOC110293127 Neighboring gene V-set and immunoglobulin domain containing 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034570.1 Chromosome 1 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transgelin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034570.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    162770887..162778232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021159137.2 → XP_021014796.1  transgelin-2

    UniProtKB/TrEMBL
    A0A6P5PGI4
    Conserved Domains (2) summary
    cd00014
    Location:25 → 136
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    pfam00402
    Location:174 → 197
    Calponin; Calponin family repeat

  2. XM_021159133.2 → XP_021014792.1  transgelin-2

    UniProtKB/TrEMBL
    A0A6P5PGI4
    Related
    MGP_CAROLIEiJ_P0021326, MGP_CAROLIEiJ_T0021326.1
    Conserved Domains (2) summary
    cd00014
    Location:25 → 136
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    pfam00402
    Location:174 → 197
    Calponin; Calponin family repeat
Nucleotide Protein
Heading Accession and Version

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