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CDK12 cyclin dependent kinase 12 [ Phascolarctos cinereus (koala) ]

Gene ID: 110215931, updated on 15-Mar-2024

Summary

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Gene symbol
CDK12
Gene description
cyclin dependent kinase 12
See related
Ensembl:ENSPCIG00000028464
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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See CDK12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018344019.1 (1964610..2044687, complement)

NW_018344019.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110215747 Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 1B Neighboring gene uncharacterized LOC110215645 Neighboring gene neuronal differentiation 2 Neighboring gene uncharacterized LOC110215932 Neighboring gene uncharacterized LOC110215774 Neighboring gene mediator complex subunit 1 Neighboring gene F-box and leucine rich repeat protein 20

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018344019 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II CTD heptapeptide repeat kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin/CDK positive transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018344019.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    1964610..2044687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020997791.1 → XP_020853450.1  cyclin-dependent kinase 12 isoform X2

    UniProtKB/TrEMBL
    A0A6P5L526
    Conserved Domains (1) summary
    cd07864
    Location:728 → 1029
    STKc_CDK12; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

  2. XM_020997790.1 → XP_020853449.1  cyclin-dependent kinase 12 isoform X1

    UniProtKB/TrEMBL
    A0A6P5L9L1
    Related
    ENSPCIP00000038693.1, ENSPCIT00000047640.2
    Conserved Domains (1) summary
    cd07864
    Location:728 → 1029
    STKc_CDK12; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

RNA

  1. XR_002326649.1 RNA Sequence

  2. XR_002326650.1 RNA Sequence

  3. XR_002326648.1 RNA Sequence

  4. XR_002326647.1 RNA Sequence

  5. XR_002326646.1 RNA Sequence

  6. XR_002326651.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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