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SLC44A2 solute carrier family 44 member 2 (CTL2 blood group) [ Phascolarctos cinereus (koala) ]

Gene ID: 110214184, updated on 15-Mar-2024

Summary

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Gene symbol
SLC44A2
Gene description
solute carrier family 44 member 2 (CTL2 blood group)
See related
Ensembl:ENSPCIG00000015531
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018344010.1 (3052124..3077429, complement)

NW_018344010.1Genomic Context describing neighboring genes Neighboring gene beta-1,3-galactosyltransferase 2-like Neighboring gene interleukin enhancer binding factor 3 Neighboring gene adaptor related protein complex 1 subunit mu 2 Neighboring gene cyclin dependent kinase inhibitor 2D

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018344010 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in choline transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline transporter-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018344010.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    3052124..3077429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020994950.1 → XP_020850609.1  choline transporter-like protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A6P5L1D7
    Conserved Domains (2) summary
    pfam04515
    Location:342 → 680
    Choline_transpo; Plasma-membrane choline transporter
    cl26602
    Location:252 → 282
    SunT; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]

  2. XM_020994951.1 → XP_020850610.1  choline transporter-like protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A6P5KX92
    Conserved Domains (2) summary
    pfam04515
    Location:340 → 678
    Choline_transpo; Plasma-membrane choline transporter
    cl26602
    Location:250 → 280
    SunT; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]

  3. XM_020994945.1 → XP_020850604.1  choline transporter-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P5L1D2
    Conserved Domains (2) summary
    pfam04515
    Location:342 → 680
    Choline_transpo; Plasma-membrane choline transporter
    cl26602
    Location:252 → 282
    SunT; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]

  4. XM_020994948.1 → XP_020850607.1  choline transporter-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P5KYW8
    Related
    ENSPCIP00000022337.2, ENSPCIT00000027540.2
    Conserved Domains (2) summary
    pfam04515
    Location:340 → 678
    Choline_transpo; Plasma-membrane choline transporter
    cl26602
    Location:250 → 280
    SunT; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]

  5. XM_020994949.1 → XP_020850608.1  choline transporter-like protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A6P5KXG9
    Related
    ENSPCIP00000021992.2, ENSPCIT00000027117.2
    Conserved Domains (2) summary
    pfam04515
    Location:340 → 678
    Choline_transpo; Plasma-membrane choline transporter
    cl26602
    Location:250 → 280
    SunT; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Nucleotide Protein
Heading Accession and Version

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