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TOP2B DNA topoisomerase II beta [ Odocoileus virginianus (white-tailed deer) ]

Gene ID: 110129897, updated on 15-Mar-2024

Summary

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Gene symbol
TOP2B
Gene description
DNA topoisomerase II beta
See related
EnsemblRapid:ENSOVIG00010018119
Gene type
protein coding
RefSeq status
MODEL
Organism
Odocoileus virginianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
Orthologs
human mouse all
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Genomic context

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See TOP2B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
38
Annotation release Status Assembly Chr Location
100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018341820.1 (776506..876355, complement)

NW_018341820.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110129900 Neighboring gene retinoic acid receptor beta Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene N-glycanase 1 Neighboring gene 3-oxoacyl-ACP synthase, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018341820 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA topological change IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in resolution of meiotic recombination intermediates IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sister chromatid segregation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA topoisomerase 2-beta
Names
topoisomerase (DNA) II beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ovir.te_1.0 Primary Assembly

Genomic

  1. NW_018341820.1 Reference Ovir.te_1.0 Primary Assembly

    Range
    776506..876355 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020881577.1 → XP_020737236.1  DNA topoisomerase 2-beta isoform X1

    UniProtKB/TrEMBL
    A0A6J0WK67
    Related
    ENSOVIP00010025803.1, ENSOVIT00010029157.1
    Conserved Domains (2) summary
    PTZ00108
    Location:43 → 1467
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    pfam08070
    Location:1504 → 1603
    DTHCT; DTHCT (NUC029) region

  2. XM_020881578.1 → XP_020737237.1  DNA topoisomerase 2-beta isoform X2

    UniProtKB/TrEMBL
    A0A6J0WHL1
    Related
    ENSOVIP00010025686.1, ENSOVIT00010029014.1
    Conserved Domains (2) summary
    PTZ00108
    Location:20 → 1444
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    pfam08070
    Location:1481 → 1580
    DTHCT; DTHCT (NUC029) region

  3. XM_020881579.1 → XP_020737238.1  DNA topoisomerase 2-beta isoform X3

    UniProtKB/TrEMBL
    A0A6J0WHM5
    Conserved Domains (2) summary
    pfam08070
    Location:1426 → 1525
    DTHCT; DTHCT (NUC029) region
    cl25574
    Location:1 → 1389
    TOP2c; TopoisomeraseII
Nucleotide Protein
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