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CNOT6L CCR4-NOT transcription complex subunit 6 like [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110085245, updated on 15-Mar-2024

Summary

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Gene symbol
CNOT6L
Gene description
CCR4-NOT transcription complex subunit 6 like
See related
Ensembl:ENSPVIG00000012062
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
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Genomic context

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See CNOT6L in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018151088.1 (189766..236458)

NW_018151088.1Genomic Context describing neighboring genes Neighboring gene extracellular matrix protein FRAS1-like Neighboring gene mitochondrial ribosomal protein L1 Neighboring gene C-X-C motif chemokine 13-like Neighboring gene interleukin-8-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018151088.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables poly(A)-specific ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA poly(A) tail shortening IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCR4-NOT complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCR4-NOT transcription complex subunit 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018151088.1 Reference pvi1.1

    Range
    189766..236458
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020805220.1 → XP_020660879.1  CCR4-NOT transcription complex subunit 6-like isoform X2

    UniProtKB/TrEMBL
    A0A6J0URT2
    Related
    ENSPVIP00000015658.1, ENSPVIT00000019567.1
    Conserved Domains (3) summary
    cd10312
    Location:186 → 533
    Deadenylase_CCR4b; C-terminal deadenylase domain of CCR4b, also known as CCR4-NOT transcription complex subunit 6-like
    COG4886
    Location:52 → 178
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:33 → 52
    LRR_1; leucine-rich repeat [structural motif]

  2. XM_020805219.1 → XP_020660878.1  CCR4-NOT transcription complex subunit 6-like isoform X1

    UniProtKB/TrEMBL
    A0A6J0ULG3
    Conserved Domains (3) summary
    cd10312
    Location:208 → 555
    Deadenylase_CCR4b; C-terminal deadenylase domain of CCR4b, also known as CCR4-NOT transcription complex subunit 6-like
    COG4886
    Location:74 → 200
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:55 → 74
    LRR_1; leucine-rich repeat [structural motif]
Nucleotide Protein
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