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Fkbp15 FKBP prolyl isomerase family member 15 [ Castor canadensis (American beaver) ]

Gene ID: 109684112, updated on 14-Mar-2024

Summary

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Gene symbol
Fkbp15
Gene description
FKBP prolyl isomerase family member 15
See related
Ensembl:ENSCCNG00000021981
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870185.1 (626972..678097)

NW_017870185.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 26 Neighboring gene solute carrier family 31 member 1 Neighboring gene solute carrier family 31 member 2 Neighboring gene nucleophosmin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017870185.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in growth cone IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FK506-binding protein 15
Names
FK506 binding protein 15
FKBP prolyl isomerase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017870185.1 Reference C.can genome v1.0

    Range
    626972..678097
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020160345.1 → XP_020015934.1  FK506-binding protein 15 isoform X3

    UniProtKB/TrEMBL
    A0A250YM42, A0A8B7U9D0
    Conserved Domains (4) summary
    pfam00254
    Location:193 → 286
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
    cl25732
    Location:561 → 879
    SMC_N; RecF/RecN/SMC N terminal domain
    cl26338
    Location:1046 → 1184
    TraD_N; F sex factor protein N terminal
    cl28087
    Location:396 → 501
    FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]

  2. XM_020160343.1 → XP_020015932.1  FK506-binding protein 15 isoform X1

    UniProtKB/TrEMBL
    A0A250YM42, A0A8B7U9I7
    Conserved Domains (4) summary
    pfam00254
    Location:193 → 286
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
    cl25732
    Location:561 → 879
    SMC_N; RecF/RecN/SMC N terminal domain
    cl28033
    Location:944 → 1195
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    cl28087
    Location:396 → 501
    FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]

  3. XM_020160344.1 → XP_020015933.1  FK506-binding protein 15 isoform X2

    UniProtKB/TrEMBL
    A0A8B7U881, A0A8C0XFC3
    Related
    ENSCCNP00000022368.1, ENSCCNT00000028661.1
    Conserved Domains (4) summary
    pfam00254
    Location:193 → 286
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
    cl25732
    Location:561 → 869
    SMC_N; RecF/RecN/SMC N terminal domain
    cl28033
    Location:934 → 1185
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    cl28087
    Location:396 → 501
    FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]

  4. XM_020160346.1 → XP_020015935.1  FK506-binding protein 15 isoform X4

    UniProtKB/TrEMBL
    A0A8B7UDD6, A0A8C0X9T0
    Related
    ENSCCNP00000022343.1, ENSCCNT00000028632.1
    Conserved Domains (4) summary
    cl19519
    Location:193 → 239
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
    cl25732
    Location:512 → 830
    SMC_N; RecF/RecN/SMC N terminal domain
    cl28033
    Location:895 → 1146
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    cl28087
    Location:347 → 452
    FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]

  5. XM_020160347.1 → XP_020015936.1  FK506-binding protein 15 isoform X5

    UniProtKB/TrEMBL
    A0A250YM42, A0A8B7U8Y9
    Conserved Domains (4) summary
    pfam00254
    Location:61 → 154
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
    cl25732
    Location:429 → 747
    SMC_N; RecF/RecN/SMC N terminal domain
    cl28033
    Location:812 → 1063
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    cl28087
    Location:264 → 369
    FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
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