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ank2b ankyrin 2b, neuronal [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109637638, updated on 14-Mar-2024

Summary

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Gene symbol
ank2b
Gene description
ankyrin 2b, neuronal
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Also known as
ank2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
54
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859677.1 (1830680..1899405)

NW_017859677.1Genomic Context describing neighboring genes Neighboring gene progestin and adipoQ receptor family member 9 Neighboring gene aconitase 1, soluble Neighboring gene arylsulfatase family, member J Neighboring gene calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859677.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cardiac muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin-2
Names
ankyrin 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859677.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    1830680..1899405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020100101.1 → XP_019955660.1  ankyrin-2 isoform X1

    Conserved Domains (8) summary
    smart00218
    Location:999 → 1136
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    cd00204
    Location:414 → 539
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:716 → 747
    ANK; ANK repeat [structural motif]
    pfam03546
    Location:2620 → 2893
    Treacle; Treacher Collins syndrome protein Treacle
    pfam13637
    Location:354 → 407
    Ank_4; Ankyrin repeats (many copies)
    cl14633
    Location:2993 → 3076
    DD; Death Domain Superfamily of protein-protein interaction domains
    cl25751
    Location:1688 → 2176
    DUF4045; Domain of unknown function (DUF4045)
    cl26761
    Location:2200 → 2492
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

  2. XM_020100104.1 → XP_019955663.1  ankyrin-2 isoform X3

    Conserved Domains (7) summary
    smart00218
    Location:995 → 1132
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    cd00204
    Location:414 → 539
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:716 → 747
    ANK; ANK repeat [structural motif]
    pfam03546
    Location:2653 → 2926
    Treacle; Treacher Collins syndrome protein Treacle
    pfam13637
    Location:354 → 407
    Ank_4; Ankyrin repeats (many copies)
    cl14633
    Location:3026 → 3109
    DD; Death Domain Superfamily of protein-protein interaction domains
    cl25751
    Location:1684 → 2172
    DUF4045; Domain of unknown function (DUF4045)

  3. XM_020100106.1 → XP_019955665.1  ankyrin-2 isoform X5

    Conserved Domains (5) summary
    smart00218
    Location:971 → 1075
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    cd00204
    Location:238 → 363
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:705 → 736
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:343 → 396
    Ank_4; Ankyrin repeats (many copies)
    cl14633
    Location:1444 → 1527
    DD; Death Domain Superfamily of protein-protein interaction domains

  4. XM_020100102.1 → XP_019955661.1  ankyrin-2 isoform X2

    Conserved Domains (7) summary
    smart00218
    Location:999 → 1136
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    cd00204
    Location:414 → 539
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:716 → 747
    ANK; ANK repeat [structural motif]
    pfam03546
    Location:2657 → 2930
    Treacle; Treacher Collins syndrome protein Treacle
    pfam13637
    Location:354 → 407
    Ank_4; Ankyrin repeats (many copies)
    cl14633
    Location:3030 → 3113
    DD; Death Domain Superfamily of protein-protein interaction domains
    cl25751
    Location:1688 → 2176
    DUF4045; Domain of unknown function (DUF4045)

  5. XM_020100105.1 → XP_019955664.1  ankyrin-2 isoform X4

    Conserved Domains (7) summary
    smart00218
    Location:999 → 1136
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    cd00204
    Location:414 → 539
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:716 → 747
    ANK; ANK repeat [structural motif]
    pfam03546
    Location:2657 → 2930
    Treacle; Treacher Collins syndrome protein Treacle
    pfam13637
    Location:354 → 407
    Ank_4; Ankyrin repeats (many copies)
    cl14633
    Location:3030 → 3113
    DD; Death Domain Superfamily of protein-protein interaction domains
    cl25751
    Location:1688 → 2176
    DUF4045; Domain of unknown function (DUF4045)
Nucleotide Protein
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