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PXN paxillin [ Bos indicus (zebu cattle) ]

Gene ID: 109571069, updated on 14-Mar-2024

Summary

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Gene symbol
PXN
Gene description
paxillin
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 17 NC_032666.1 (65838952..65861679, complement)

Chromosome 17 - NC_032666.1Genomic Context describing neighboring genes Neighboring gene GCN1 activator of EIF2AK4 Neighboring gene uncharacterized LOC109571068 Neighboring gene ribosomal protein lateral stalk subunit P0 Neighboring gene 40S ribosomal protein SA pseudogene Neighboring gene sirtuin 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032666.1 Chromosome 17 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endothelial cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
paxillin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032666.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    65838952..65861679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019977221.1 → XP_019832780.1  paxillin isoform X4

    UniProtKB/TrEMBL
    A0A6P5D4J6
    Conserved Domains (6) summary
    cd09407
    Location:847 → 898
    LIM2_Paxillin; The second LIM domain of paxillin
    cd09409
    Location:906 → 958
    LIM3_Paxillin; The third LIM domain of paxillin
    cd09411
    Location:965 → 1016
    LIM4_Paxillin; The fourth LIM domain of Paxillin
    cd09336
    Location:788 → 840
    LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
    pfam03535
    Location:1 → 120
    Paxillin; Paxillin family
    cl26464
    Location:159 → 453
    Atrophin-1; Atrophin-1 family

  2. XM_019977219.1 → XP_019832778.1  paxillin isoform X2

    UniProtKB/TrEMBL
    A0A6P5D3W4
    Conserved Domains (6) summary
    cd09407
    Location:727 → 778
    LIM2_Paxillin; The second LIM domain of paxillin
    cd09409
    Location:786 → 838
    LIM3_Paxillin; The third LIM domain of paxillin
    cd09411
    Location:845 → 896
    LIM4_Paxillin; The fourth LIM domain of Paxillin
    cd09336
    Location:668 → 720
    LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
    pfam03535
    Location:1 → 120
    Paxillin; Paxillin family
    cl26464
    Location:159 → 453
    Atrophin-1; Atrophin-1 family

  3. XM_019977218.1 → XP_019832777.1  paxillin isoform X1

    UniProtKB/TrEMBL
    A0A6P5D784
    Conserved Domains (6) summary
    cd09407
    Location:761 → 812
    LIM2_Paxillin; The second LIM domain of paxillin
    cd09409
    Location:820 → 872
    LIM3_Paxillin; The third LIM domain of paxillin
    cd09411
    Location:879 → 930
    LIM4_Paxillin; The fourth LIM domain of Paxillin
    cd09336
    Location:702 → 754
    LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
    pfam03535
    Location:1 → 120
    Paxillin; Paxillin family
    cl26464
    Location:159 → 453
    Atrophin-1; Atrophin-1 family

  4. XM_019977220.1 → XP_019832779.1  paxillin isoform X3

    UniProtKB/TrEMBL
    A0A6P5D5R9
    Conserved Domains (6) summary
    cd09407
    Location:629 → 680
    LIM2_Paxillin; The second LIM domain of paxillin
    cd09409
    Location:688 → 740
    LIM3_Paxillin; The third LIM domain of paxillin
    cd09411
    Location:747 → 798
    LIM4_Paxillin; The fourth LIM domain of Paxillin
    cd09336
    Location:570 → 622
    LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
    pfam03535
    Location:1 → 120
    Paxillin; Paxillin family
    cl26464
    Location:159 → 453
    Atrophin-1; Atrophin-1 family

  5. XM_019977224.1 → XP_019832783.1  paxillin isoform X5

    UniProtKB/TrEMBL
    A0A6P5D3D1
    Conserved Domains (4) summary
    cd09409
    Location:309 → 361
    LIM3_Paxillin; The third LIM domain of paxillin
    cd09336
    Location:191 → 243
    LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
    cl02475
    Location:250 → 301
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    pfam03535
    Location:1 → 120
    Paxillin; Paxillin family

  6. XM_019977222.1 → XP_019832781.1  paxillin isoform X5

    UniProtKB/TrEMBL
    A0A6P5D3D1
    Conserved Domains (4) summary
    cd09409
    Location:309 → 361
    LIM3_Paxillin; The third LIM domain of paxillin
    cd09336
    Location:191 → 243
    LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
    cl02475
    Location:250 → 301
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    pfam03535
    Location:1 → 120
    Paxillin; Paxillin family

  7. XM_019977223.1 → XP_019832782.1  paxillin isoform X5

    UniProtKB/TrEMBL
    A0A6P5D3D1
    Conserved Domains (4) summary
    cd09409
    Location:309 → 361
    LIM3_Paxillin; The third LIM domain of paxillin
    cd09336
    Location:191 → 243
    LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
    cl02475
    Location:250 → 301
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    pfam03535
    Location:1 → 120
    Paxillin; Paxillin family
Nucleotide Protein
Heading Accession and Version

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