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thrb thyroid hormone receptor beta [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108933378, updated on 19-Jun-2024

Summary

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Gene symbol
thrb
Gene description
thyroid hormone receptor beta
See related
Ensembl:ENSSFOG00015026437
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 23
Exon count:
13
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 23 NC_041828.1 (7370313..7430139)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371767.1 (3816574..3876159, complement)

Chromosome 23 - NC_041828.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase II beta Neighboring gene retinoic acid receptor beta Neighboring gene nuclear receptor subfamily 1, group D, member 2b Neighboring gene ribosomal protein L15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinoic acid receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in thyroid hormone receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thyroid hormone receptor beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041828.1 Reference fSclFor1.1 Primary Assembly

    Range
    7370313..7430139
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018750363.2 → XP_018605879.1  thyroid hormone receptor beta isoform X1

    UniProtKB/TrEMBL
    A0A8C9WL10

  2. XM_018750362.2 → XP_018605878.1  thyroid hormone receptor beta isoform X1

    UniProtKB/TrEMBL
    A0A8C9WL10

  3. XM_018750366.2 → XP_018605882.1  thyroid hormone receptor beta isoform X2

    UniProtKB/TrEMBL
    A0A8C9U9M7, A0A8C9WL10
    Related
    ENSSFOP00015059325.1, ENSSFOT00015064533.1

  4. XM_018750365.2 → XP_018605881.1  thyroid hormone receptor beta isoform X1

    UniProtKB/TrEMBL
    A0A8C9WL10

  5. XM_018750367.2 → XP_018605883.1  thyroid hormone receptor beta isoform X3

    UniProtKB/TrEMBL
    A0A8C9WL10
    Related
    ENSSFOP00015060349.1, ENSSFOT00015073602.1

  6. XM_018750364.2 → XP_018605880.1  thyroid hormone receptor beta isoform X1

    UniProtKB/TrEMBL
    A0A8C9WL10
Nucleotide Protein
Heading Accession and Version

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