U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TFCP2L1 transcription factor CP2 like 1 [ Lepidothrix coronata (blue-crowned manakin) ]

Gene ID: 108501544, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
TFCP2L1
Gene description
transcription factor CP2 like 1
See related
Ensembl:ENSLCOG00000002386
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepidothrix coronata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Lepidothrix
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TFCP2L1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Lepidothrix_coronata-1.0 (GCF_001604755.1) Unplaced Scaffold NW_016690283.1 (2037340..2074523, complement)

NW_016690283.1Genomic Context describing neighboring genes Neighboring gene inhibin subunit beta B Neighboring gene GLI family zinc finger 2 Neighboring gene uncharacterized LOC108501545 Neighboring gene cytoplasmic linker associated protein 1 Neighboring gene uncharacterized LOC108501541

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_016690283.1 Unplaced Scaffold Reference Lepidothrix_coronata-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor CP2-like protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Lepidothrix coronata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lepidothrix_coronata-1.0

Genomic

  1. NW_016690283.1 Reference Lepidothrix_coronata-1.0

    Range
    2037340..2074523 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017823541.1 → XP_017679030.1  transcription factor CP2-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6J0HXP2
    Related
    ENSLCOP00000003813.1, ENSLCOT00000004060.1

  2. XM_017823543.1 → XP_017679032.1  transcription factor CP2-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6J0HX41
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.