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ZFP42 ZFP42 zinc finger protein [ Manis javanica (Malayan pangolin) ]

Gene ID: 108386662, updated on 14-Mar-2024

Summary

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Gene symbol
ZFP42
Gene description
ZFP42 zinc finger protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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See ZFP42 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023435917.1 (12321160..12326801)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016561221.1 (43901..49209, complement)

NW_023435917.1Genomic Context describing neighboring genes Neighboring gene COP9 signalosome complex subunit 3-like Neighboring gene uncharacterized LOC118967868 Neighboring gene tripartite motif family like 2 Neighboring gene tripartite motif family like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PcG protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 42 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023435917.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    12321160..12326801
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017644650.2 → XP_017500139.2  zinc finger protein 42 homolog

    Conserved Domains (2) summary
    COG5048
    Location:203 → 295
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:208 → 228
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_017644652.2 → XP_017500141.2  zinc finger protein 42 homolog

    Conserved Domains (2) summary
    COG5048
    Location:203 → 295
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:208 → 228
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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