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TRIM41 tripartite motif containing 41 [ Protobothrops mucrosquamatus ]

Gene ID: 107289618, updated on 14-Mar-2024

Summary

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Gene symbol
TRIM41
Gene description
tripartite motif containing 41
Gene type
protein coding
RefSeq status
MODEL
Organism
Protobothrops mucrosquamatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops
Orthologs
human mouse all
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Genomic context

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See TRIM41 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current P.Mucros_1.0 (GCF_001527695.2) Unplaced Scaffold NW_015387011.1 (456467..465925)

NW_015387011.1Genomic Context describing neighboring genes Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene transfer RNA valine (anticodon CAC) Neighboring gene receptor for activated C kinase 1 Neighboring gene histone H1B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015387011 Unplaced Scaffold Reference P.Mucros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase TRIM41

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Protobothrops mucrosquamatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.Mucros_1.0 Primary Assembly

Genomic

  1. NW_015387011.1 Reference P.Mucros_1.0 Primary Assembly

    Range
    456467..465925
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015818409.1 → XP_015673895.1  E3 ubiquitin-protein ligase TRIM41

    Conserved Domains (3) summary
    cd00021
    Location:245 → 282
    BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
    pfam15227
    Location:26 → 59
    zf-C3HC4_4; zinc finger of C3HC4-type, RING
    cl02614
    Location:451 → 621
    SPRY; SPRY domain
Nucleotide Protein
Heading Accession and Version

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