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SEMA4B semaphorin 4B [ Parus major (Great Tit) ]

Gene ID: 107209299, updated on 3-Aug-2024

Summary

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Gene symbol
SEMA4B
Gene description
semaphorin 4B
See related
Ensembl:ENSPMJG00000011998
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 10 NC_031779.1 (19869971..19878867)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 10 NC_029279.1 (19870280..19878867)

Chromosome 10 - NC_031779.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 710 Neighboring gene isocitrate dehydrogenase (NADP(+)) 2 Neighboring gene calcium and integrin binding 1 Neighboring gene GDP-D-glucose phosphorylase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemorepellent activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of axon extension involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural crest cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
semaphorin-4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031779.1 Reference Parus_major1.1 Primary Assembly

    Range
    19869971..19878867
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015638778.2 → XP_015494264.1  semaphorin-4B

    Related
    ENSPMJP00000015840.1, ENSPMJT00000020756.1
    Conserved Domains (3) summary
    cd05872
    Location:576 → 658
    Ig_Sema4B_like; Immunoglobulin (Ig)-like domain of the class IV semaphorin Sema4B
    pfam01437
    Location:504 → 549
    PSI; Plexin repeat
    cl15693
    Location:38 → 503
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
Nucleotide Protein
Heading Accession and Version

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