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Virma vir like m6A methyltransferase associated [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107142506, updated on 1-Aug-2024

Summary

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Gene symbol
Virma
Gene description
vir like m6A methyltransferase associated
See related
Ensembl:ENSMMMG00000007702
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Also known as
Kiaa1429
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000093.1 (41226808..41291770, complement)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351226.1 (41226780..41291738, complement)

NW_026000093.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene RAD54 homolog B Neighboring gene fibrinogen silencer binding protein Neighboring gene uncharacterized LOC125610514 Neighboring gene non-histone chromosomal protein HMG-17-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA N6-methyladenosine methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein virilizer homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000093.1 Reference marMar

    Range
    41226808..41291770 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015485965.2 → XP_015341451.1  protein virilizer homolog isoform X2

    UniProtKB/TrEMBL
    A0AAJ7AK21
    Conserved Domains (2) summary
    pfam15502
    Location:1673 → 1778
    MPLKIP; M-phase-specific PLK1-interacting protein
    pfam15912
    Location:5 → 206
    VIR_N; Virilizer, N-terminal

  2. XM_015485964.2 → XP_015341450.1  protein virilizer homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C5Z2Y4
    Related
    ENSMMMP00000008695.1
    Conserved Domains (2) summary
    pfam15502
    Location:1702 → 1807
    MPLKIP; M-phase-specific PLK1-interacting protein
    pfam15912
    Location:5 → 235
    VIR_N; Virilizer, N-terminal

  3. XM_048782810.1 → XP_048638767.1  protein virilizer homolog isoform X4

    UniProtKB/TrEMBL
    A0AAJ8CMJ4

  4. XM_048782809.1 → XP_048638766.1  protein virilizer homolog isoform X4

    UniProtKB/TrEMBL
    A0AAJ8CMJ4

  5. XM_015485966.2 → XP_015341452.1  protein virilizer homolog isoform X3

    UniProtKB/TrEMBL
    A0AAJ7AKC3
    Conserved Domains (1) summary
    pfam15912
    Location:5 → 235
    VIR_N; Virilizer, N-terminal

  6. XM_048782811.1 → XP_048638768.1  protein virilizer homolog isoform X5

    UniProtKB/TrEMBL
    A0AAJ8CMX6
Nucleotide Protein
Heading Accession and Version

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