U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ABTB1 ankyrin repeat and BTB domain containing 1 [ Gekko japonicus ]

Gene ID: 107122952, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ABTB1
Gene description
ankyrin repeat and BTB domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015175972.1 (1651823..1707057, complement)

NW_015175972.1Genomic Context describing neighboring genes Neighboring gene kelch repeat and BTB domain containing 12 Neighboring gene monoglyceride lipase Neighboring gene podocalyxin like 2 Neighboring gene minichromosome maintenance complex component 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015175972.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: ankyrin repeat and BTB/POZ domain-containing protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015175972.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    1651823..1707057 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015426098.1 → XP_015281584.1  LOW QUALITY PROTEIN: ankyrin repeat and BTB/POZ domain-containing protein 1

    Conserved Domains (6) summary
    smart00225
    Location:272 → 373
    BTB; Broad-Complex, Tramtrack and Bric a brac
    cd00204
    Location:6 → 76
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00651
    Location:272 → 371
    BTB; BTB/POZ domain
    pfam13857
    Location:21 → 76
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:1 → 33
    ANK; ANK repeat [structural motif]
    cl00452
    Location:403 → 466
    AAK; Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.