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PTGR1 prostaglandin reductase 1 [ Gekko japonicus ]

Gene ID: 107109016, updated on 18-Sep-2024

Summary

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Gene symbol
PTGR1
Gene description
prostaglandin reductase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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See PTGR1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015164721.1 (303329..349991, complement)

NW_015164721.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107109018 Neighboring gene thioredoxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015164721.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 15-oxoprostaglandin 13-oxidase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 2-alkenal reductase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prostaglandin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin reductase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015164721.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    303329..349991 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015409586.1 → XP_015265072.1  prostaglandin reductase 1

    Conserved Domains (2) summary
    TIGR02825
    Location:7 → 328
    B4_12hDH; leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase
    cd08294
    Location:7 → 329
    leukotriene_B4_DH_like; 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

  2. XM_015409587.1 → XP_015265073.1  prostaglandin reductase 1

    Conserved Domains (2) summary
    TIGR02825
    Location:7 → 328
    B4_12hDH; leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase
    cd08294
    Location:7 → 329
    leukotriene_B4_DH_like; 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

  3. XM_015409585.1 → XP_015265071.1  prostaglandin reductase 1

    Conserved Domains (2) summary
    TIGR02825
    Location:7 → 328
    B4_12hDH; leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase
    cd08294
    Location:7 → 329
    leukotriene_B4_DH_like; 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity
Nucleotide Protein
Heading Accession and Version

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