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SPAG5 sperm associated antigen 5 [ Calidris pugnax (ruff) ]

Gene ID: 106894386, updated on 13-Mar-2024

Summary

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Gene symbol
SPAG5
Gene description
sperm associated antigen 5
See related
Ensembl:ENSCPUG00000020034
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090977.1 (2471965..2480977)

NW_015090977.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase related Neighboring gene putative serine/threonine-protein kinase F31E3.2 Neighboring gene aldolase, fructose-bisphosphate C Neighboring gene phosphatidylinositol glycan anchor biosynthesis class S

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015090977.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of attachment of spindle microtubules to kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sperm-associated antigen 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015090977.1 Reference ASM143184v1

    Range
    2471965..2480977
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014953019.1 → XP_014808505.1  sperm-associated antigen 5

    Related
    ENSCPUP00000029917.1, ENSCPUT00000035196.1
    Conserved Domains (6) summary
    pfam12795
    Location:714 → 902
    MscS_porin; Mechanosensitive ion channel porin domain
    pfam13870
    Location:828 → 991
    DUF4201; Domain of unknown function (DUF4201)
    pfam15621
    Location:21 → 94
    PROL5-SMR; Proline-rich submaxillary gland androgen-regulated family
    cl02488
    Location:816 → 1005
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl09111
    Location:1088 → 1205
    Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
    cl19764
    Location:676 → 910
    COG6; Conserved oligomeric complex COG6
Nucleotide Protein
Heading Accession and Version

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