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BECN1 beclin 1 [ Sturnus vulgaris (Common starling) ]

Gene ID: 106858650, updated on 3-Aug-2024

Summary

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Gene symbol
BECN1
Gene description
beclin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnus vulgaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sturnidae; Sturnus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Sturnus_vulgaris-1.0 (GCF_001447265.1) Unplaced Scaffold NW_014650663.1 (1428362..1432413, complement)

NW_014650663.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly factor 3 homolog, mitochondrial Neighboring gene cyclin N-terminal domain containing 1 Neighboring gene proteasome activator subunit 3 Neighboring gene membrane primary amine oxidase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014650663.1 Unplaced Scaffold Reference Sturnus_vulgaris-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to nitrogen starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of phosphatidylinositol 3-kinase complex, class III, type I IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of phosphatidylinositol 3-kinase complex, class III, type II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beclin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnus vulgaris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sturnus_vulgaris-1.0

Genomic

  1. NW_014650663.1 Reference Sturnus_vulgaris-1.0

    Range
    1428362..1432413 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014885423.1 → XP_014740909.1  beclin-1

    Conserved Domains (3) summary
    pfam15285
    Location:105 → 127
    BH3; Beclin-1 BH3 domain, Bcl-2-interacting
    pfam04111
    Location:265 → 443
    APG6; Autophagy protein Apg6
    pfam17675
    Location:133 → 259
    APG6_N; Apg6 coiled-coil region
Nucleotide Protein
Heading Accession and Version

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