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DCAF4 DDB1 and CUL4 associated factor 4 [ Anser cygnoides (Swan goose) ]

Gene ID: 106042514, updated on 5-Aug-2024

Summary

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Gene symbol
DCAF4
Gene description
DDB1 and CUL4 associated factor 4
See related
EnsemblRapid:ENSACDG00000000959
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 5 NC_089877.1 (31331136..31344263)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927692.1 (4746472..4759631, complement)

Chromosome 5 - NC_089877.1Genomic Context describing neighboring genes Neighboring gene double PHD fingers 3 Neighboring gene uncharacterized LOC136791011 Neighboring gene zinc finger FYVE-type containing 1 Neighboring gene RNA binding motif protein 25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DDB1- and CUL4-associated factor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089877.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    31331136..31344263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048065243.2 → XP_047921200.2  DDB1- and CUL4-associated factor 4 isoform X1

  2. XM_048065242.2 → XP_047921199.2  DDB1- and CUL4-associated factor 4 isoform X1

  3. XM_048065244.2 → XP_047921201.1  DDB1- and CUL4-associated factor 4 isoform X2

    Conserved Domains (3) summary
    COG2319
    Location:178 → 360
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:129 → 180
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:270 → 370
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_013191457.3 → XP_013046911.1  DDB1- and CUL4-associated factor 4 isoform X2

    See identical proteins and their annotated locations for XP_013046911.1

    Related
    ENSACDP00000001500.1
    Conserved Domains (3) summary
    COG2319
    Location:178 → 360
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:129 → 180
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:270 → 370
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_066998698.1 → XP_066854799.1  DDB1- and CUL4-associated factor 4 isoform X2

Nucleotide Protein
Heading Accession and Version

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