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Abce1 ATP binding cassette subfamily E member 1 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105995707, updated on 13-Mar-2024

Summary

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Gene symbol
Abce1
Gene description
ATP binding cassette subfamily E member 1
See related
Ensembl:ENSDORG00000016691
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267335.1 (2755505..2778024, complement)

NW_012267335.1Genomic Context describing neighboring genes Neighboring gene SMAD family member 1 Neighboring gene OTU deubiquitinase 4 Neighboring gene anaphase promoting complex subunit 10 Neighboring gene hedgehog interacting protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267335.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosomal small subunit binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational termination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family E member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267335.1 Reference Dord_2.0

    Range
    2755505..2778024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013029539.1 → XP_012884993.1  ATP-binding cassette sub-family E member 1

    See identical proteins and their annotated locations for XP_012884993.1

    UniProtKB/TrEMBL
    A0A1S3G843
    Related
    ENSDORP00000015701.2, ENSDORT00000016691.2
    Conserved Domains (1) summary
    COG1245
    Location:4 → 597
    Rli1; Translation initiation factor RLI1, contains Fe-S and AAA+ ATPase domains [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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