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ZSCAN18 zinc finger and SCAN domain containing 18 [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105867740, updated on 13-Mar-2024

Summary

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Gene symbol
ZSCAN18
Gene description
zinc finger and SCAN domain containing 18
See related
Ensembl:ENSMICG00000017853
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 22 NC_033681.1 (4945591..4990670)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012204130.1 (337666..382997)

Chromosome 22 - NC_033681.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 274 Neighboring gene zinc finger protein 329 Neighboring gene uncharacterized LOC105867742 Neighboring gene eukaryotic translation initiation factor 1A, Y-chromosomal-like Neighboring gene zinc finger protein 135 Neighboring gene zinc finger and SCAN domain-containing protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and SCAN domain-containing protein 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033681.1 Reference Mmur_3.0 Primary Assembly

    Range
    4945591..4990670
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012758090.2 → XP_012613544.2  zinc finger and SCAN domain-containing protein 18 isoform X1

    UniProtKB/TrEMBL
    A0A8B7FW18
    Conserved Domains (4) summary
    sd00017
    Location:459 → 479
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02023
    Location:45 → 132
    SCAN; SCAN domain
    cl02581
    Location:226 → 268
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl26563
    Location:334 → 423
    DUF2339; Predicted membrane protein (DUF2339)

  2. XM_012758094.1 → XP_012613548.1  zinc finger and SCAN domain-containing protein 18 isoform X1

    See identical proteins and their annotated locations for XP_012613548.1

    UniProtKB/TrEMBL
    A0A8B7FW18
    Related
    ENSMICP00000016259.2, ENSMICT00000017853.3
    Conserved Domains (4) summary
    sd00017
    Location:459 → 479
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02023
    Location:45 → 132
    SCAN; SCAN domain
    cl02581
    Location:226 → 268
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl26563
    Location:334 → 423
    DUF2339; Predicted membrane protein (DUF2339)

  3. XM_020283233.1 → XP_020138822.1  zinc finger and SCAN domain-containing protein 18 isoform X2

    UniProtKB/TrEMBL
    A0A8B7WTZ0
    Conserved Domains (4) summary
    sd00017
    Location:452 → 472
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02023
    Location:45 → 132
    SCAN; SCAN domain
    cl02581
    Location:219 → 261
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl26563
    Location:327 → 416
    DUF2339; Predicted membrane protein (DUF2339)

  4. XM_020283235.1 → XP_020138824.1  zinc finger and SCAN domain-containing protein 18 isoform X4

    UniProtKB/TrEMBL
    A0A8B7WU56
    Conserved Domains (4) summary
    sd00017
    Location:413 → 433
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02023
    Location:45 → 132
    SCAN; SCAN domain
    cl02581
    Location:180 → 222
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl26563
    Location:288 → 377
    DUF2339; Predicted membrane protein (DUF2339)

  5. XM_020283236.1 → XP_020138825.1  zinc finger and SCAN domain-containing protein 18 isoform X5

    UniProtKB/TrEMBL
    A0A8B7WVK0
    Conserved Domains (4) summary
    sd00017
    Location:406 → 426
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02023
    Location:45 → 132
    SCAN; SCAN domain
    cl02581
    Location:173 → 215
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl26563
    Location:281 → 370
    DUF2339; Predicted membrane protein (DUF2339)

  6. XM_012758088.2 → XP_012613542.1  zinc finger and SCAN domain-containing protein 18 isoform X1

    See identical proteins and their annotated locations for XP_012613542.1

    UniProtKB/TrEMBL
    A0A8B7FW18
    Related
    ENSMICP00000045688.1, ENSMICT00000067218.1
    Conserved Domains (4) summary
    sd00017
    Location:459 → 479
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02023
    Location:45 → 132
    SCAN; SCAN domain
    cl02581
    Location:226 → 268
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl26563
    Location:334 → 423
    DUF2339; Predicted membrane protein (DUF2339)

  7. XM_020283234.1 → XP_020138823.1  zinc finger and SCAN domain-containing protein 18 isoform X3

    UniProtKB/TrEMBL
    A0A8B7WUB0
    Conserved Domains (3) summary
    sd00017
    Location:426 → 446
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02581
    Location:193 → 235
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl26563
    Location:301 → 390
    DUF2339; Predicted membrane protein (DUF2339)

  8. XM_020283237.1 → XP_020138826.1  zinc finger and SCAN domain-containing protein 18 isoform X6

    UniProtKB/TrEMBL
    A0A8B7WTZ8
    Conserved Domains (3) summary
    sd00017
    Location:380 → 400
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02581
    Location:147 → 189
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl26563
    Location:255 → 344
    DUF2339; Predicted membrane protein (DUF2339)

  9. XM_020283238.1 → XP_020138827.1  zinc finger and SCAN domain-containing protein 18 isoform X7

    UniProtKB/TrEMBL
    A0A8B7WTZ5
    Conserved Domains (3) summary
    sd00017
    Location:373 → 393
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02581
    Location:140 → 182
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl26563
    Location:248 → 337
    DUF2339; Predicted membrane protein (DUF2339)
Nucleotide Protein
Heading Accession and Version

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