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TEF TEF transcription factor, PAR bZIP family member [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105805280, updated on 13-Mar-2024

Summary

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Gene symbol
TEF
Gene description
TEF transcription factor, PAR bZIP family member
See related
Ensembl:ENSPCOG00000013129
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See TEF in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012136747.1 (1954067..1975553, complement)

NW_012136747.1Genomic Context describing neighboring genes Neighboring gene PHD finger protein 5A Neighboring gene transducer of ERBB2, 2 Neighboring gene zinc finger CCCH-type containing 7B Neighboring gene Ran GTPase activating protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012136747.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thyrotroph embryonic factor
Names
TEF, PAR bZIP transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012136747.1 Reference Pcoq_1.0 Primary Assembly

    Range
    1954067..1975553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012638151.1 → XP_012493605.1  thyrotroph embryonic factor isoform X2

    See identical proteins and their annotated locations for XP_012493605.1

    UniProtKB/TrEMBL
    A0A2K6ESP1, A0A2K6ESP4
    Related
    ENSPCOP00000004745.1, ENSPCOT00000015051.1
    Conserved Domains (1) summary
    cd14695
    Location:202 → 260
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain

  2. XM_012638150.1 → XP_012493604.1  thyrotroph embryonic factor isoform X1

    See identical proteins and their annotated locations for XP_012493604.1

    UniProtKB/TrEMBL
    A0A2K6ESP4, A0A2K6ESP5
    Related
    ENSPCOP00000004748.1, ENSPCOT00000015056.1
    Conserved Domains (1) summary
    cd14695
    Location:232 → 290
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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