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GALNT4 polypeptide N-acetylgalactosaminyltransferase 4 [ Aotus nancymaae (Ma's night monkey) ]

Gene ID: 105728791, updated on 19-Apr-2024

Summary

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Gene symbol
GALNT4
Gene description
polypeptide N-acetylgalactosaminyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Aotus nancymaae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988428.1 (11166367..11171435)
101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018503925.1 (32540754..32543688)

NW_026988428.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135275360 Neighboring gene uncharacterized LOC105728790 Neighboring gene large ribosomal subunit protein uL2m-like Neighboring gene ATPase plasma membrane Ca2+ transporting 1 Neighboring gene POC1 centriolar protein B Neighboring gene transmembrane protein 160-like Neighboring gene uncharacterized LOC110569280

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polypeptide N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

Genomic

  1. NW_026988428.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Range
    11166367..11171435
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012469359.3 → XP_012324782.1  polypeptide N-acetylgalactosaminyltransferase 4

    Conserved Domains (4) summary
    cd02510
    Location:138 → 432
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:134 → 430
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:446 → 576
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:446 → 574
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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