1XHB,2D7I,1VCL,2DRZ,1GGP,1SZ6,4G1R,4D0Z


Conserved Protein Domain Family
Ricin_B_lectin

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pfam00652: Ricin_B_lectin (this model, PSSM-Id:279046 is obsolete and has been replaced by 395527)
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Ricin-type beta-trefoil lectin domain
Statistics
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PSSM-Id: 279046
Aligned: 85 rows
Threshold Bit Score: 60.6227
Created: 20-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1XHB_A 343 SLGEIRNV--ETNQCLDNMARKE----NEKVGIFNCHGM-GGnQVFSYTANKEIRT----DDLCLDv-----SKLNGPVT 406  house mouse
Q82HL7 420 SFAQVVNA--DSGLCLDIRDGVMd--lGTDVVTAPCTSSrT--QRWRVDTARGVLQssedPDFCLDs----rGSTDRGVG 489  Streptomyces avermit...
Q825H7 404 RQTRLRNL--AADLCLDVRGEAKa---GAGTKLAVCSSAwT--QQWTYEKDGLLRSva-dPELCLDsgavdgVAELGRCV 475  Streptomyces avermit...
Q825I1 713 VQGRIRNA--DSGLCIGIGKNKAv--aGAEAVLVDCTSSaT--QRWEYETDGLLRSla-aPELCLDs------hLGYSVQ 779  Streptomyces avermit...
O86669 331 RTTYFTGG--EPAQCLSAAAGPPg---LGEVSIRSCDGSaS--QKWDVDQDGTIRPrn-dRDYCLTa-------LARKAG 395  Streptomyces coelicolor
Q9SLV9  37 GATHLVGR---DGLCLEMSPWYKpagiNFPTRLSPCDEKkQT-QLWTIVGDGTIRPm--nDKFCLAae--vfYGVINKAV 108  cucumber
O04071 314 VTRRISGR---DGLCVDVRDGLAk--dGNPVQLLSCGQQsS--QQWTFRTDGTIRS----LGKCLTns---gDSSGNYAM 379  European elder
Q8LKQ3  10 PTVRFVGR---NGLCLDVPEGDYh--dGSRIQLWPCKSNsDQnQLWTIRRDGTIRS----NGRCLTty---gYTAGSYIM 77   Viscum coloratum
1GGP_B   4 ATVRIAGR---DGFCADVNGEGQn---GAAIILKKCAENdN--QLWTLKREATIRS----NGGCLTt----aAAEQAKAG 67   Trichosanthes kirilowii
Q9SLV9 165 LNSMVANIewLNNLCLQSTDDSS------HVGLNGCNTD-NKyQRWALYADGTIRQhv-nKNYCLTs----dQDFGRFVV 232  cucumber
1XHB_A 407 MLKCHh----LKG-NQLWEYDPVKLtLQHVN--SNQCLDKATEEDs---qVPSIRDC-TGSRSQQW 461  house mouse
Q82HL7 490 IWECGav--yGRN-GRNLRFTVDAQgVIRPAvaPDHAVTPYGD-------ALFLVPa-EGRAAQRW 544  Streptomyces avermitilis
Q825H7 476 AESSA-----HGG-DVRYDLTVQGE-VLSRR--KG-SLAVTPGNTdp-daDIVVK-VrDGSDKQRW 529  Streptomyces avermitilis
Q825I1 780 LAACAgesqpGTK-NVRYDFTLQGSlVPRWN--QDLALTSASGGRg---aALVLK-PrTDSESQRW 838  Streptomyces avermitilis
O86669 396 LTRCEp----GRP-NQQWH--------RNPW--QGTAWPRNAWQIsgsvnRCLYQD--DRRLPARW 444  Streptomyces coelicolor
Q9SLV9 109 VSECGk----VSDpNKKWTQKNDGT-IALVD--SRMVLTGDLD-------YVTLQ-SnKYTPSQSW 159  cucumber
O04071 380 IYNCDt----AIRdATKWVLSIDGT-ITHRL--SGLVLTAPQAAQg---tTLLLQ-KnIHAASQGW 434  European elder
Q8LKQ3  78 IYDCNr----GGWdLTTWQIRGNGI-ILNPR--SMMVIGTPSGSRgtrgtTFTLQ-TlGYSLGQGW 135  Viscum coloratum
1GGP_B  68 IYDCTq----ATAeLSAWEIADNGT-IINPA--SSLVLSSGAANSl---lDLGVQ-TnSYASAQGW 122  Trichosanthes kirilowii
Q9SLV9 233 VSKCE-----DKP-QQRWSLDAKDYtIDHPN--TDMVLDVFSVPDst-fpSVLVTNRrDGSASQRW 289  cucumber
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