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CADM2 cell adhesion molecule 2 [ Aotus nancymaae (Ma's night monkey) ]

Gene ID: 105718834, updated on 6-Jun-2024

Summary

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Gene symbol
CADM2
Gene description
cell adhesion molecule 2
See related
Ensembl:ENSANAG00000034873
Gene type
protein coding
RefSeq status
MODEL
Organism
Aotus nancymaae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988435.1 (9924875..11014304, complement)
101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018509353.1 (2957757..4069864, complement)

NW_026988435.1Genomic Context describing neighboring genes Neighboring gene phosphoglycerate kinase 1-like Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA U3 Neighboring gene heme-binding protein 1-like Neighboring gene aldo-keto reductase family 1 member B1-like Neighboring gene U7 small nuclear RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in neuronal cell body membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell adhesion molecule 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

Genomic

  1. NW_026988435.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Range
    9924875..11014304 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012454659.3 → XP_012310082.1  cell adhesion molecule 2 isoform X2

    See identical proteins and their annotated locations for XP_012310082.1

    UniProtKB/TrEMBL
    A0A2K5EMW9, A0A2K5EN02
    Related
    ENSANAP00000034547.1
    Conserved Domains (5) summary
    smart00294
    Location:388 → 406
    4.1m; putative band 4.1 homologues' binding motif
    smart00408
    Location:240 → 303
    IGc2; Immunoglobulin C-2 Type
    cd00096
    Location:242 → 251
    Ig; Ig strand B [structural motif]
    cd05884
    Location:120 → 223
    IgI_2_Necl-3; Second immunoglobulin (Ig)-like domain of nectin-like molecule-3 (Necl-3); member of the I-set of Ig superfamily domains
    cd07701
    Location:26 → 121
    IgV_1_Necl-3; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-3; member of the V-set of Ig superfamily (IgSF) domains

  2. XM_012454658.2 → XP_012310081.2  cell adhesion molecule 2 isoform X1

    UniProtKB/TrEMBL
    A0A2K5EMW9

  3. XM_064380014.1 → XP_064236084.1  cell adhesion molecule 2 isoform X3

    UniProtKB/TrEMBL
    A0A2K5EMW1, A0A2K5EMY2
Nucleotide Protein
Heading Accession and Version

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