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ZGRF1 zinc finger GRF-type containing 1 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105571540, updated on 13-Mar-2024

Summary

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Gene symbol
ZGRF1
Gene description
zinc finger GRF-type containing 1
See related
Ensembl:ENSCATG00000030107
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012002843.1 (15940652..16022139, complement)

NW_012002843.1Genomic Context describing neighboring genes Neighboring gene TOX high mobility group box family member 4-like Neighboring gene uncharacterized LOC105571455 Neighboring gene neurogenin 2 Neighboring gene La ribonucleoprotein 7, transcriptional regulator Neighboring gene oligosaccharyltransferase complex subunit OSTC pseudogene Neighboring gene 60S ribosomal protein L32 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012002843.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ZGRF1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012002843.1 Reference Caty_1.0

    Range
    15940652..16022139 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012029278.1 → XP_011884668.1  protein ZGRF1

    UniProtKB/TrEMBL
    A0A2K5LFS6
    Related
    ENSCATP00000011820.1, ENSCATT00000035946.1
    Conserved Domains (5) summary
    COG1112
    Location:1852 → 2186
    DNA2; Superfamily I DNA and/or RNA helicase [Replication, recombination and repair]
    pfam06839
    Location:1460 → 1504
    zf-GRF; GRF zinc finger
    pfam10382
    Location:142 → 186
    DUF2439; Protein of unknown function (DUF2439)
    pfam13086
    Location:1727 → 1957
    AAA_11; AAA domain
    pfam13087
    Location:1968 → 2152
    AAA_12; AAA domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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