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DDX43 DEAD-box helicase 43 [ Colobus angolensis palliatus ]

Gene ID: 105513547, updated on 13-Mar-2024

Summary

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Gene symbol
DDX43
Gene description
DEAD-box helicase 43
See related
Ensembl:ENSCANG00000029269
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012115500.1 (961367..983184)

NW_012115500.1Genomic Context describing neighboring genes Neighboring gene oocyte expressed protein Neighboring gene stathmin pseudogene Neighboring gene RNA-binding protein 8A pseudogene Neighboring gene cyclic GMP-AMP synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012115500.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX43

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012115500.1 Reference Cang.pa_1.0

    Range
    961367..983184
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011944433.1 → XP_011799823.1  probable ATP-dependent RNA helicase DDX43

    UniProtKB/TrEMBL
    A0A2K5I569
    Related
    ENSCANP00000011774.1, ENSCANT00000034674.1
    Conserved Domains (4) summary
    PTZ00424
    Location:241 → 622
    PTZ00424; helicase 45; Provisional
    cd00079
    Location:488 → 589
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    cd00105
    Location:76 → 128
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    cd00268
    Location:251 → 448
    DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
Nucleotide Protein
Heading Accession and Version

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